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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911535.1_cds_XP_016461515.1_54826
CDS Infomation

[gene=LOC107784846] [db_xref=GeneID:107784846] [protein=aspartic proteinase PCS1-like] [protein_id=XP_016461515.1] [location=complement(19040..20389)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCTAGAGTTTTTGTTCTTCTTCTTCTCATAATCTTCAATTTTCTCTAC
ATCTCAGCACAAAAAACCATTAAACATAAGCCTTTTTCTATGTCATTTCCTCTTATTTCA
ACATCTTTATCACATAACTCTTCTTCTAAAGCTCTTTTTCTTTCTTCTTTTATGGCTTCT
AATAATAGAAGACAAACTCAAAATACAAAAACTATGTCTAGAATTCCATCTTTGAACTAT
AAATCAACTTTTAAATATTCAATGGCTTTAATTGTTACACTACCAATAGGAACACCACCA
CAAAATCAACAAATGGTTTTGGACACTGGTAGCCAACTTTCTTGGATTCAATGTCATAAG
AAAATTCCCAAAAGACCCCCACCAACGACGTCGTTTGATCCTTCTTTGTCTTCTACTTTC
TCTGTTCTTCCTTGTACTCATCCTTTATGTAAGCCAAGAATTCCCGATTTTACCCTTCCA
ACTACTTGTGACCAAAATCGTTTGTGCCACTATTCCTACTTTTATGCTGATGGTACTTTA
GCTGAGGGTAATCTTGTCCGTGAAAAAATTACATTTTCACGTTCCCAAAGTACCCCTCCT
TTGATTCTTGGTTGTGCGACCGAGTCCGAAGATGCTGAGGGTATTTTGGGAATGAATCTT
GGACGGTTTTCTTTTGCCTCCCAAGCTAAGGTACAAAAATTCTCATATTGCGTGCCAATT
AGACAAGGTAGCCATGCAGTTAAACCTAGTGGAACATTTTACCTAGGCCAAAACCCTAAT
TCCCATACATTTCAATACATAAATCTTTTGACTTTTCCTCAAAGTCAACGCATGCCAAAT
TTGGATCCACTAGCTTTTACTGTTGGCATGGTGGGGATAAAAATTGGCGGCAAAAAATTA
AACATCTCCGGGAGGGTTTTCCGGCCAAACGCTGGTGGTTCCGGCCAGACGATCATTGAT
TCCGGCACGGAGTACACTTTCTTAGTGGAAGAAGCGTACAATAAGGTCAGAGAAGAAATT
GTTAGGTTAGTAGGTCCAAGATTGAAAAAAGGTTACGTTTATGGTGGTGCACTCGACATG
TGCTTCGATAACCGTCCGATCGAAATCGGACGGTTGATAGGTGATATGACATTGCAATTT
GAAAACGGGGTTGATATTTTGATCAATAAGGAAAGGATGTTGGATGAAGTAGAAGGTGGG
ATCCATTGTGTTGGAATCGGACGGTCAGAATCACTTGGAATAGCAAGCAATATTATTGGT
AATTTTCACCAGCAAAATTTATGGGTAGAATTTGATATGAGAAATCGACGAGTAGGTTTT
GGCAAAGGAGAGTGTAGTAGGCAAGTGTAA

Peptide Sequence

PEP ID

XP_016461515.1
PEP Infomation

PREDICTED: aspartic proteinase PCS1-like [Nicotiana tabacum]
Sequence

MASSSRVFVLLLLIIFNFLYISAQKTIKHKPFSMSFPLISTSLSHNSSSKALFLSSFMAS
NNRRQTQNTKTMSRIPSLNYKSTFKYSMALIVTLPIGTPPQNQQMVLDTGSQLSWIQCHK
KIPKRPPPTTSFDPSLSSTFSVLPCTHPLCKPRIPDFTLPTTCDQNRLCHYSYFYADGTL
AEGNLVREKITFSRSQSTPPLILGCATESEDAEGILGMNLGRFSFASQAKVQKFSYCVPI
RQGSHAVKPSGTFYLGQNPNSHTFQYINLLTFPQSQRMPNLDPLAFTVGMVGIKIGGKKL
NISGRVFRPNAGGSGQTIIDSGTEYTFLVEEAYNKVREEIVRLVGPRLKKGYVYGGALDM
CFDNRPIEIGRLIGDMTLQFENGVDILINKERMLDEVEGGIHCVGIGRSESLGIASNIIG
NFHQQNLWVEFDMRNRRVGFGKGECSRQV

Transcript Sequence

Gene sequence data has not been registered.